Links: Hamilton Institute Thesis Archive

Year Authors Title
  2014 LopezCaamal, F. and Oyarzun, D. and Middleton, R. and R.Garcia, M. Spatial quantification of cytosolic Ca2+ accumulation in nonexcitable cells: An analytical study Computational Biology and Bioinformatics, IEEE/ACM Transactions on. DOI: 10.1109/TCBB.2014.2316010 [bibtex]
  2014 Oyarzun, Diego A and Bramhall, Jo L and Lopez-Caamal, Fernando and Richards, Frances M and Jodrell, Duncan and Krippendorff, Ben-Fillippo The EGFR demonstrates linear signal transmission Integrative Biology, 6(8), pp736--742. DOI: 10.1039/C4IB00062E [bibtex]
  2013 Oyarzun, Diego A and LopezCaamal, Fernando and Garcia, Miriam R and Middleton, Richard H and Weisse, Andrea Y Cumulative signal transmission in nonlinear reaction-diffusion networks PloS one, 8(5). DOI: 10.1371/journal.pone.0062834 [bibtex]
  2011 D. A. Oyarzun Optimal control of metabolic networks with saturable enzyme kinetics. IET Systems Biology, in press [bibtex]
  2010 F. LopezCaamal, D. A. Oyarzun, J. A. Moreno, D. Kalamatianos Control structure and limitations of biochemical networks Proceedings of the American Control Conference 2010, pp6668 - 6673 [bibtex]
  2010 Diego A. Oyarzun A control-theoretic approach to dynamic optimization of metabolic networks PhD Thesis, Hamilton Institute, NUI Maynooth, Ireland [bibtex]
  2010 D.A. Oyarzun and M. Chaves Global gene regulation in metabolic networks. Under review [bibtex]
  2009 D. Oyarzun, B. Ingalls, R.H. Middleton and D. Kalamatianos Sequential activation of metabolic pathways: a dynamic optimization approach. Bulletin of Mathematical Biology, 71(8), pp1851-1872. DOI: 10.1007/s11538-009-9427-5 [bibtex]
  2009 A. Peters, D. Oyarzun, E. Silva, and M. Salgado. Analytic characterization of a stabilizing feedback for LTI plants European Control Conference, Budapest, Hungary, 2009 [bibtex]
  2009 Ben-Fillippo Krippendorff, Diego Oyarzun and Wilhelm Huisinga Ligand accumulation counteracts therapeutic inhibition of receptor systems Foundations of Systems Biology & Engineering 2009, Denver, USA., pp173-176 [bibtex]
  2008 P. Lezana, J. Rodríguez, and D. Oyarzun Cascaded multilevel inverter with regeneration capability and reduced number of switches. IEEE Transactions on Industrial Electronics, 55, pp1059-1066 [bibtex]
  2008 D. Oyarzun, B. Ingalls, R. Middleton, and D. Kalamatianos Optimal metabolic pathway activation. Proceedings of the 17th IFAC World Congress, Seoul, Korea. [bibtex]
  2007 M. Salgado, D. Oyarzun and E. Silva H2 optimal ripple-free deadbeat controller design Automatica, 43(11), pp1961-1967 [bibtex]
  2007 M. Salgado and D. Oyarzun Double objective optimal multivariable ripple-free deadbeat control International Journal of Control, 80(5), pp763-773 [bibtex]
  2007 E. Silva, D. Oyarzun and M. Salgado On structurally constrained H2 performance bounds for stable mimo plant models IET Control Theory & Applications, 1(4), pp1033-1054 [bibtex]
  2007 D. Oyarzun, B. Ingalls, and D. Kalamatianos Optimal metabolic regulation by time varying enzyme activities: a control theoretic approach Proceedings of the Foundations of Systems Biology in Engineering Conference 2007, pp 491-496, Stuttgart, Germany. [bibtex]
  2007 D. Oyarzun and M. Salgado Optimal triangular approximation for linear stable multivariable systems Proceedings of American Control Conference, New York, USA, pp. 5158-5153. [bibtex]
  2007 D. Oyarzun and E. Silva Effect of downstream feedback on the achievable performance of feedback control loops for serial processes Proceedings of European Control Conference, Kos, Greece, pp. 1727-1733. [bibtex]
  2006 M. Salgado and D. Oyarzun Basic integrated modelling: A case study International Journal on Electrical Engineering Education, 43(3), pp217-231 [bibtex]
  2006 D. Oyarzun and M. Salgado Suboptimal triangular controller design methodology for full MIMO stable systems Proceedings of the 6th bi-ennial UKACC Control Conference, Glasgow, Scotland. [bibtex]
  2005 P. Lezana, J. Rodríguez, D. Oyarzun and J. Pontt Novel cell based on reduced single-phase active front end for multicell converters Proceedings of the 31st Annual Conference of the IEEE Industrial Electronics Society, Raleigh, USA, pp. 733-738. [bibtex]
  2005 M. Salgado and D. Oyarzun MIMO interactions in sampled-data systems Proceedings of the 16th IFAC World Congress, Prague, Czech Republic. [bibtex]

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