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Publications 

Links: Hamilton Institute Thesis Archive

Year Authors Title
  2009 F. Knorn, R. Stanojevic, M. Corless, and R. Rhorten A Framework for Decentralised Feedback Connectivity Control with Application to Sensor Networks International Journal of Control, 82(11), pp2095-2114. DOI: 10.1080/00207170902912056 [bibtex]
  2009 F. Knorn, O. Mason, R. Shorten On Linear Co-positive Lyapunov Functions for Sets of Linear Positive Systems Automatica, 45(8), pp1943-1947. DOI: 10.1016/j.automatica.2009.04.013 [bibtex]
  2009 Ben-Fillippo Krippendorff, Diego Oyarzun and Wilhelm Huisinga Ligand accumulation counteracts therapeutic inhibition of receptor systems Foundations of Systems Biology & Engineering 2009, Denver, USA., pp173-176 [bibtex]
  2009 V. G. Subramanian, K. R. Duffy and D. J. Leith. Existence and uniqueness of fair rate allocations in lossy wireless networks IEEE Transactions on Wireless Communications, 8(7), pp3401-3406. DOI: 10.1109/TWC.2009.080808 [bibtex]
  2009 F. Knorn, O. Mason, R. Shorten Applications of Linear Co-positive Lyapunov Functions for Switched Linear Positive Systems Proc. POSTA'09, Valencia, Spain [bibtex]
  2009 F. Knorn, R. Stanojevic, M. Corless, and R. Rhorten A Problem in Positive Systems Stability Arising in Topology Control Proc. POSTA'09, Valencia, Spain [bibtex]
  2009 Venkataramana Badarla, Vijay Subramanian, Douglas J Leith Low-delay Dynamic Routing Using Fountain Codes IEEE Communication Letters, 13(7), pp552-554. DOI: 10.1109/LCOMM.2009.081997 [bibtex]
  2009 BF Krippendorff, R Neuhaus, P Lienau, A Reichel, W Huisinga Mechanism-Based Inhibition: Deriving KI and kinact Directly from Time-Dependent IC50 Values Journal of Biomolecular Screening, 14, pp913-923. DOI: 10.1177/1087057109336751 [bibtex]
  2009 B.-F. Krippendorff, K. Küster, C. Kloft, W. Huisinga Nonlinear Pharmacokinetics of Therapeutic Proteins Resulting from Receptor Mediated Endocytosis J. Pharmacokinet. Pharmacodyn., 36, pp239-260. DOI: 10.1007/s10928-009-9120-1 [bibtex]
  2009 Mathieu Cloutier, Fiachra B. Bolger, John P. Lowry, Peter Wellstead An integrative dynamic model of brain energy metabolism using in vivo neurochemical measurements Journal of Computational Neuroscience. DOI: 10.1007/s10827-009-0152-8 [bibtex]
  2009 Mathieu Cloutier, Pierre O. Poliquin, Mario Jolicoeur, Peter Wellstead An integrative modelling approach for the implications of energy metabolism in neurodegeneration Foundations of Systems Biology in Engineering 2009 (FOSBE) [bibtex]
  2009 D. Malone and L.A. Malone Ambient Radiofrequency Power: the Impact of the Number of Devices in a Wi-Fi Network Health Physics, 96(6), pp629-635. DOI: 10.1097/01.HP.0000341329.79077.29 [bibtex]
  2009 D. Malone, D.J. Leith and I. Dangerfield Inferring Queue State by Measuring Delay in a WiFi Network. International Workshop on Traffic Monitoring and Analysis (TMA 2009, LNCS 5537). DOI: 10.1007/978-3-642-01645-5_2 [bibtex]
  2009 R. Shorten, M. Corless, R.H. Middleton, S. Klinge, and K. Wulff A quadratic stability result for singular switched systems with application to anti-windup control 2009 American Control Conference. DOI: 10.1109/ACC.2009.5160413 [bibtex]
  2009 J.S. Freudenberg and R.H. Middleton Stabilization and performance over a Gaussian communication channel for a plant with time delay 2009 American Control Conference. DOI: 10.1109/ACC.2009.5160645 [bibtex]
  2009 J. dos Santos Ferreira and R.H. Middleton, An In-Silico Analysis of the SMART Study of HIV Infection 6th IFAC Symposium on Modelling and Control in Biomedical Systems [bibtex]
  2009 M. Quinlan and R.H. Middleton Multiple Model Kalman Filters: A Localization Technique for RoboCup Soccer 2009 RoboCup Symposium [bibtex]
  2009 S. Klinge and R.H. Middleton Time Headway Requirements for String Stability of Homogeneous Linear Unidirectionally Connected Systems 48th IEEE Conference on Decision and Control, pp1992 - 1997. DOI: 10.1109/CDC.2009.5399965 [bibtex]
  2009 S. Klinge and R.H. Middleton String Stability Analysis of Homogeneous Linear Unidirectionally Connected Systems with nonzero Initial Conditions Irish Signals & Systems Conference [bibtex]
  2009 Qizhi Cao, Tianji Li, and Douglas Leith Achieving Fairness in Lossy 802.11e Wireless Multi-Hop Mesh Networks MeshTech 2009, co-located with IEEE MASS 2009 [bibtex]
  2009 Ł. Budzisz, R. Stanojevic, R. Shorten and F. Baker A Strategy for Fair Coexistence of Loss and Delay-Based Congestion Control Algorithms IEEE Communications Letters, 13(7), pp 555-557. DOI: 10.1109/LCOMM.2009.090305 [bibtex]
  2009 Ł. Budzisz, R. Stanojevic, A. Schlote, R. Shorten and F. Baker On the fair coexistence of loss- and delay-based TCP 17th IEEE International Workshop on Quality of Service [bibtex]
  2009 Barak A. Pearlmutter and Conor J. Houghton A New Hypothesis for Sleep: Tuning for Criticality Neural Computation, 21(6). DOI: 10.1162/neco.2009.05-08-787 [bibtex]
  2009 M. Akelbek and S. Kirkland Coefficients of Ergodicity and the Scrambling Index Linear Algebra and its Applications, 430(4), pp1111-1130. DOI: doi:10.1016/j.laa.2008.10.007 [bibtex]
  2009 M. Akelbek and S. Kirkland Primitive Digraphs with Largest Scrambling Index Linear Algebra and its Applications, 430(4), pp1099-1110. DOI: doi:10.1016/j.laa.2008.10.006 [bibtex]
  2009 R.M. Tifenbach and S.J. Kirkland Directed Intervals and the Dual of a Graph Linear Algebra and its Applications, 431(5-7), pp792-807. DOI: doi:10.1016/j.laa.2009.03.032 [bibtex]
  2009 S. Kirkland A Cycle-based Bound for Subdominant Eigenvalues of Stochastic Matrices Linear and Multilinear Algebra, 57(3), pp247-266. DOI: DOI: 10.1080/03081080701669309 [bibtex]
  2009 S. Kirkland Near Threshold Graphs Electronic Journal of Combinatorics, 16(1) [bibtex]
  2009 E. Hernandez-Vargas, P. Colaneri, R.H. Middleton, F. Blanchini Discrete-time control for switched positive systems with application to mitigating viral escape International Journal of Robust and Nonlinear Control [bibtex]
  2009 MR García, C Vilas, E Balsa-Canto, AA Alonso Real Time Optimisation for thermal Processe Proceedings of the European Control Conference 2009 - Budapest, Hungary, pp2039-2044 [bibtex]
  2009 Duessmann, H. and Wenus, J. and Kalamatianos, D. and Paul, P. and Wellstead, P. and Huber, H. and Prehn, J. Real-Time automated live cell image acquisition and analysis using confocal laser scanning microscopy Neuroscience [bibtex]
  2009 Kalamatianos, D. and Anastasiadis, A. D. and Liatsis, P. A nonextensive method for spectroscopic data analysis with artificial neural networks Brazilian Journal of Physics, 39(2A), pp488-494 [bibtex]
  2009 Paul, P. and Duessmann, H. and Bernas, T. and Huber, H. and Kalamatianos, D. Automatic noise quantification for confocal fluorescence microscopy images Computerized Medical Imaging and Graphics [bibtex]
  2009 Paul, P. and Kalamatianos, D. and Huber, H. and Wenus, J. and Duessmann, H. Automatic Real-Time Detection of the Onset of Apoptosis in Confocal Fluorescence Microscopy Proceedings of the Focus on Microscopy Conference [bibtex]
  2009 Wenus, J. and Duessmann, H. and Paul, P. and Kalamatianos, D. and Rehm, M. and Wellstead, P. and Prehn, J. and Huber, H. ALISSA - An Automated Live-Cell Imaging System for Signal-Transduction Analyses Biotechniques [bibtex]
  2009 Mathieu Cloutier and Peter Wellstead The Control Systems Structures of Energy Metabolism Interface Journal of the Royal Society . DOI: 10.1098/rsif.2009.0371 [bibtex]
  2009 Peter Wellstead On the Industrialisation of Biology AI & Society. DOI: 10.1007/s00146-009-0232-3 [bibtex]
  2009 H. Qi, D. Malone, V.G. Subramanian Does Every Bit Need the Same Power? An Investigation on Unequal Power Allocation for Irregular LDPC Codes The 2009 International Conference on Wireless communications and Signal Processing (WCSP 2009), pp1-5. DOI: 10.1109/WCSP.2009.5371640 [bibtex]
  2009 H. Qi, D. Malone, D. Botvich 802.11 Wireless LAN Multiplayer Game Capacity and Optimization The 8th Annual Workshop on Network and Systems Support for Games (NetGames 2009), pp1-6. DOI: 10.1109/NETGAMES.2009.5446237 [bibtex]
  2009 Tianji Li, Douglas Leith, and Lili Qiu Opportunistic Routing for Interactive Traffic in Wireless Networks IEEE ICNP (poster) [bibtex]
  2009 Rade Stanojevic, Robert Shorten Load balancing vs. distributed rate limiting: an unifying framework for cloud control IEEE International Conference on Communications (ICC). [bibtex]
  2009 R. Stanojevic, R. Shorten Generalized Distributed Rate Limiting Proc. IEEE IWQoS [bibtex]
  2009 N. Véron, H. Bauer, A. Y. Weiße, G. Lüder, M. Werber, and B. G. Herrmann Retention of gene products in syncytial spermatids promotes non-Mendelian inheritance as revealed by the t-complex-responder Genes & Development, 23, pp2705-10. DOI: 10.1101/gad.553009 [bibtex]
  2009 S. Kirkland and M. Neumann The Case of Equality in the Dobrushin-Deutsch-Zenger Bound Linear Algebra and its Applications, 431, pp2373-2394 [bibtex]
  2009 S.Kirkland Subdominant Eigenvalues for Stochastic Matrices with Given Column Sums Electronic Journal of Linear Algebra , 18, pp784-800 [bibtex]
  2009 O. Mason, V.S. Bokharaie and R. Shorten Stability and D-stability for Switched Positive Systems Proc. POSTA 2009, Valencia, Spain [bibtex]
  2009 Max von Kleist Combining Pharmacology and Mutational Dynamics to Understand and Combat Drug Resistance in HIV. PhD Thesis, Hamilton Institute, NUI Maynooth [bibtex]
  2009 Andrea Weiße Global Sensitivity Analysis of Ordinary Differential Equations. PhD Thesis, Hamilton Institute, NUI Maynooth, Ireland [bibtex]
  2009 Ross O'Neill Modality Specific Optimally Encoded Sensory Substitution Techniques: Hardware and Signal Processing Developments PhD Thesis. Hamilton Institute, NUI Maynooth, Ireland. [bibtex]
  2009 Carlos Villegas Topics on Integrated Chassis Control PhD Thesis, Hamilton Institute, NUI Maynooth, Ireland [bibtex]
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