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Journal Articles, Books and Book Chapters

[15]E. Bullinger, R. Findeisen, D. Kalamatianos, and P. Wellstead. System and control theory furthers the understanding of biological signal transduction. In I. Queinnec, S. Tarbouriech, G. Garcia, and S-I. Niculescu, editors, Biology and Control Theory: Current Challenges, volume 357 of Lecture Notes in Control and Information Sciences, pages 123–135. Springer-Verlag, 2007.
[14]T. Eißing, S. Waldherr, F. Allgower, P. Scheurich, and E. Bullinger. Response to bistability in apoptosis: Roles of Bax, Bcl-2, and mitochondrial permeability transition pores. Biophys. J., 92(9):3332–3334, 2007. (PMID:17277182)
[13]T. Eißing, S. Waldherr, F. Allgöwer, P. Scheurich, and E. Bullinger. Steady state and (bi-)stability evaluation of simple protease signalling networks. BioSystems, 2007. In press. (PMID:17314003)
[12]T. Millat, E. Bullinger, J. Rohwer, and O. Wolkenhauer. Approximations and their consequences for dynamic modelling of signal transduction pathways. Math Bioscience, 207:40–57, 2007. (PMID:17070871)
[11]M. Nickel, E. Bullinger, and F. Beckmann. Functional morphology of Tethya species (porifera): 2. Three-dimensional morphometrics on spicules and skeleton superstructures of T. minuta. Zoomorphology, 125(4):225–239, 2006.
[10]E. Bullinger and F. Allgöwer. Adaptive λ-tracking for nonlinear higher relative degree systems. Automatica, 41(7):1191–2000, 2005.
[9]T. Eißing, F. Allgöwer, and E. Bullinger. Robustness properties of apoptosis models with respect to parameter variations and intrinsic noise. IEE Proceedings - Systems Biology, 152(4):221–228, 2005. (PMID:16986264)
[8]H. Conzelmann, J. Saez-Rodriguez, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. Reduction of mathematical models of signaltransduction networks: Simulation-based approach applied to EGF receptor signaling. IEE Systems Biology, 1(1):159–169, 2004. (PMID:17052126)
[7]T. Eißing, H. Conzelmann, E.D. Gilles, F. Allgöwer, E. Bullinger, and P. Scheurich. Bistability analyses of a caspase activation model for receptor-induced apoptosis. J. Biol. Chem., 279(35):36892–36897, 2004. (PMID:15208304)
[6]A. Kremling, S. Fischer, K. Gadkar, F. J. Doyle, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. A benchmark for methods in reverse engineering and model discrimination: problem formulation and solutions. Genome Res., 14(9):1773–1785, 2004. (PMID:15342560)
[5]T. Sauter and E. Bullinger. Detailed mathematical modeling of metabolic and regulatory networks. BIOforum Europe, 2004(2):62–64, 2004.
[4]P. Schumm, E. Bullinger, T. Schweickhardt, and F. Allgöwer. Integration and interaction: Opportunities of using notebooks and internet for teaching in control engineering. AT-Automatisierungstechnik, 52(2):81–89, 2004.
[3]M. Ederer, T. Sauter, E. Bullinger, E.D. Gilles, and F. Allgöwer. An approach for dividing models of biological reaction networks into functional units. Simulation: Trans. Society for Modeling and Simulation International, 79(12):703–716, 2003.
[2]L. Imsland, R. Findeisen, E. Bullinger, F. Allgöwer, and B.A. Foss. A note on stability, robustness and performance of output feedback nonlinear model predictive control.. J. Process Control, 13(7):633–644, 2003.
[1]C.W. Frei, E. Bullinger, A. Gentilini, A.H. Glattfelder, T. Sieber, and A.M. Zbinden. Artifact-tolerant controllers for automatic drug delivery in anesthesia. Crit. Rev. Biomed. Eng., 28(1–2):187–192, 2000. (PMID:10999384)

Proceedings

[23]T. Eißing, S. Waldherr, C. Gondro, E. Bullinger, O. Sawodny, F. Allgöwer, P. Scheurich, and T. Sauter. Sensitivity analysis of programmed cell death and implications for crosstalk phenomena during Tumor Necrosis Factor stimulation. In Proc. IEEE Conference on Control Applications, Munich, pages 1746–1752, 2006.
[22]M. Farina, R. Findeisen, E. Bullinger, S. Bittanti, F. Allgöwer, and P. Wellstead. Results towards identifiability properties of biochemical reaction networks. In Proc. of the 45th IEEE Conf. on Decision and Control, San Diego, USA, pages 2104–2109, 2006.
[21]S. Streif, R. Findeisen, and E. Bullinger. Relating cross Gramians and sensitivity analysis in systems biology. In Proc. of the 17th International Symposium on Mathematical Theory of Networks and Systems, 24-28 July, Kyoto, Japan, pages 437–442, 2006.
[20]E. Bullinger. System analysis of a programmed cell death model. In Proc. of the 44th IEEE Conf. on Decision and Control and European Control Conference, ECC'05, Seville, Spain, pages 7994–7999, 2005.
[19]C. Cimatoribus, T. Eißing, N. Elvassore, F. Allgöwer, and E. Bullinger. Model discrimination tools in apoptosis. In Foundations of Systems Biology FOSBE 2005, August 7-­10, Santa Barbara, CA, USA, pages 197–200, 2005.
[18]I.R. Ofiteru, V. Lavric, F. Allgöwer, and E. Bullinger. Sensitivity analysis of Escherichia coli's Tricarboxilic Acid Cycle under anaerobic conditions. In Foundations of Systems Biology FOSBE 2005, August 7-­10, Santa Barbara, CA, USA, pages 337–340, 2005.
[17]P. Wellstead, O. Mason, W.T. O'Connor, K-H. Cho, E. Bullinger, O. Wolkenhauer, and S. Duncan. Towards a systems understanding of the cerebral motor circuit. In Foundations of Systems Biology FOSBE 2005, August 7-­10, Santa Barbara, CA, USA, pages 185–188, 2005.
[16]P. Schumm, E. Bullinger, T. Schweickhardt, and F. Allgöwer. Der Einsatz neuer Medien in der regelungstechnischen Ausbildung. In GMA-Kongress, Baden-Baden, pages 1061–1068, 2003.
[15]E. Bullinger, T. Sauter, F. Allgöwer, and E.D. Gilles. On deriving a hybrid model for carbohydrate uptake in escherichia coli. In Proc. of the 15th IFAC World Congress, Barcelona, Spain, 2002. Paper Number 1231.
[14]C. Burger, E. Bullinger, S. Papakosta, and T. Wagner. Context awareness for application sharing in teaching environment. In Int. Conf. Advances in Infrastructure for e-Business, e-Education, e-Science, and e-Medicine on the Internet (SSGRR 2002w), Aquila, Italy, 2002.
[13]C. Burger, S. Papakosta, E. Bullinger, and T. Wagner. Investigation of application sharing systems for teaching purposes in engineering disciplines. In 4th Int. Conf. New Educational Environment, Lugano, Switzerland, 2002.
[12]E. Bullinger, R. Findeisen, and F. Allgöwer. Adaptive λ-tracking of nonlinear systems with higher relative degree using reduced-order high gain control. In Proc. of the IFAC Nonlinear Control Systems Design, NOLCOS01, St. Petersburg, Russia, pages 92–97, 2001.
[11]L. Imsland, R. Findeisen, E. Bullinger, F. Allgöwer, and B.A. Foss. On output feedback nonlinear model predictive control using high gain observers for a class of systems. In 6th IFAC Symposium on Dynamics and Control of Process Systems, DYCOPS-6, Jejudo, Korea, pages 91–96, 2001.
[10]A. Kremling, T. Sauter, E. Bullinger, M. Ederer, F. Allgöwer, and E.D. Gilles. Perspectives in biosystems engineering. In The Second International Conference on Systems Biology, Pasadena, CA, USA, pages 282–290, 2001.
[9]E. Bullinger and F. Allgöwer. Adaptive λ-tracking for nonlinear systems with higher relative degree. In Proc. of the 39th IEEE Conf. on Decision and Control, Sydney, Australia, pages 4771–4776, 2000.
[8]E. Bullinger, R. Findeisen, F. Kraus, and F Allgöwer. Some further results on adaptive λ-tracking for linear systems with high relative degree. In Proc. of the 2000 American Control Conf., volume 5, pages 3655–3660, Chicago, Il, 2000.
[7]E. Bullinger, C.W. Frei, T.J. Sieber, A.H. Glattfelder, F. Allgöwer, and A.M. Zbinden. Adaptive λ-tracking in anesthesia. In E. Carson and E. Salzsieder, editors, Proc. of the 4th IFAC Symposium Modelling and Control in Biomedical Systems, pages 181–186, Greifswald, 2000.
[6]E. Bullinger and F. Allgöwer. Adaptive λ-tracking for linear systems with higher relative degree—the continuous adaptation case. In Proc. of the 5th European Control Conference, ECC'99, Karlsruhe, Germany, 1999. Paper ID 511.
[5]E. Bullinger, A. Ilchmann, and F. Allgöwer. Piecewise constant high-gain adaptive λ-tracking for higher relative degree linear systems. In Proc. of the 14th IFAC World Congress, Beijing, China, volume 5, pages 249–254, 1999.
[4]C.W. Frei, E. Bullinger, T. Sieber, A.H. Glattfelder, and A.M. Zbinden. Artefakttolerante Regelungen für die Anästhesie. In Fortschritts-Berichte VDI, Reihe 17, Nr. 183, AUTOMED '99, Beiträge zum Workshop "Automatisierungstechnische Verfahren für die Medizin", 25./26. Februar, Darmstadt, pages 37–38, 1999.
[3]E. Bullinger, A. Ilchmann, and F. Allgöwer. A simple adaptive observer for nonlinear systems. In Proc. of the IFAC Nonlinear Control Systems Design, NOLCOS98, Enschede, The Netherlands, volume 3, pages 781–786, 1998.
[2]E. Bullinger and F. Allgöwer. An adaptive high-gain observer for nonlinear systems. In Proc. of the 36th IEEE Conf. on Decision and Control, San Diego, USA, pages 4348–4353, 1997.
[1]R. Bacher and E. Bullinger. Application of non-stationary iterative methods to an exact Newton-Raphson solution process for power flow equations. In 12th Power Systems Computation Conference, Dresden, Germany, pages 453–459, 1996.

Other/Internal Reports

[9]T. Sauter, Schliemann M., T. Eißing, E. Bullinger, E.D. Gilles, F. Allgöwer, and Scheurich P. Mathematical modelling of TNF induced apoptosis and anti-apoptotic crosstalk in mammalian cells. 6th International Conference on Systems Biology ICSB 2005, October 19-­24, Boston, MA, USA, 2005.
[8]H. Conzelmann, J. Saez-Rodriguez, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. Domain oriented model reduction of signal transduction models. In 5th International Conference on Systems Biology ­ ICSB 2004, October 9­-13, Heidelberg/Germany, 2004.
[7]T. Eißing, H. Conzelmann, E.D. Gilles, F. Allgöwer, E. Bullinger, and P. Scheurich. Mathematical modelling applied to caspase activation reveals a requirement for additional control. In 5th International Conference on Systems Biology ­ ICSB 2004, October 9-­13, Heidelberg/Germany, 2004.
[6]H. Conzelmann, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. Modellreduktion und Analyse des metabolen Netzwerks der Zuckeraufnahme in Escherichia coli. Dechema Jahrestagung, München, 2003.
[5]A. Haubelt, E. Bullinger, T. Sauter, F. Allgöwer, and E.D. Gilles. Systems biology—a glossary from two perspectives. The Third International Conference on Systems Biology, Stockholm, Sweden, December 2002.
[4]A. Kremling, S. Fischer, F.J. Doyle, K. Gadkar, T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. A benchmark for methods in reverse engineering and model discrimination: Problem formulation and solutions. The Third International Conference on Systems Biology, Stockholm, Sweden, December 2002.
[3]R. Findeisen, E. Bullinger, and F. Allgöwer. On using high gain observers for control. BatchPro Meeting in Louvain-la-Neuve, Belgium, November 23rd 2001.
[2]T. Sauter, E. Bullinger, F. Allgöwer, and E.D. Gilles. Hypothesis testing in Escherichia coli using mathematical modeling. Workshop: Complexity in Biosystems: Innovative Approaches at the Interface of Experimental and Computational Modeling, DIMACS, Rutgers University, Picataway, NJ, April 2001.
[1]E. Bullinger and F. Kraus. Solvability of certain matrix inequalities. Technical Report 99-06, Automatic Control Laboratory, Swiss Federal Institute of Technology (ETH), Zürich, Switzerland, March 1999.

Eric Bullinger, 12 April 2007