Hamilton Institute PublicationsHamilton Institute Publicationshttp://www.hamilton.ie/publications.htm\n Control structure and limitations of biochemical networks, Proceedings of the American Control Conference 2010 2010 6668 - 6673 F. LopezCaamal, D. A. Oyarzun, J. A. Moreno, D. Kalamatianos http://www.hamilton.ie/LopCaF/publications/Lopez-Caamal_etal_ControlBio_ACC_2010.pdf Conference Paper 2010 http://www.hamilton.ie/LopCaF/publications/Lopez-Caamal_etal_ControlBio_ACC_2010.pdf Sequential activation of metabolic pathways: a dynamic optimization approach., Bulletin of Mathematical Biology 2009 71 8 1851-1872 D. Oyarzun, B. Ingalls, R.H. Middleton and D. Kalamatianos http://www.hamilton.ie/rick/publications/Diego09JournalPublished.pdf Journal Paper 2009 http://www.hamilton.ie/rick/publications/Diego09JournalPublished.pdf Real-Time automated live cell image acquisition and analysis using confocal laser scanning microscopy, Neuroscience 2009 Duessmann, H. and Wenus, J. and Kalamatianos, D. and Paul, P. and Wellstead, P. and Huber, H. and Prehn, J. Conference Paper 2009 A nonextensive method for spectroscopic data analysis with artificial neural networks, Brazilian Journal of Physics 2009 39 2A 488-494 Kalamatianos, D. and Anastasiadis, A. D. and Liatsis, P. Journal Paper 2009 Automatic noise quantification for confocal fluorescence microscopy images, Computerized Medical Imaging and Graphics 2009 Paul, P. and Duessmann, H. and Bernas, T. and Huber, H. and Kalamatianos, D. Submitted paper 2009 Automatic Real-Time Detection of the Onset of Apoptosis in Confocal Fluorescence Microscopy, Proceedings of the Focus on Microscopy Conference 2009 Paul, P. and Kalamatianos, D. and Huber, H. and Wenus, J. and Duessmann, H. Conference Paper 2009 ALISSA - An Automated Live-Cell Imaging System for Signal-Transduction Analyses, Biotechniques 2009 Wenus, J. and Duessmann, H. and Paul, P. and Kalamatianos, D. and Rehm, M. and Wellstead, P. and Prehn, J. and Huber, H. Submitted paper 2009 The Role of Control and System Theory in Systems Biology., Annual Reviews in Control 2008 32 33-47 P. Wellstead, E. Bullinger, D. Kalamatianos, O. Mason and M. Verwoerd Journal Paper 2008 Automatic quality assessment for fluorescence microscopy images. , 8th IEEE International Conference on BioInformatics and BioEngineering, 2008. BIBE 2008. 2008 P. Paul, D. Kalamatianos, H. Duessmann, H. Huber http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=4696665&isnumber=4696632 Conference Paper 2008 http://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=4696665&isnumber=4696632 Automated live cell image segmentation for on-line high-content screening, 9th International Conference on Systems Biology 2008 P. Paul, D. Kalamatianos, H. Duessmann, H. Huber Conference Paper 2008 Optimal metabolic pathway activation., Proceedings of the 17th IFAC World Congress, Seoul, Korea. 2008 D. Oyarzun, B. Ingalls, R. Middleton, and D. Kalamatianos http://www.ifac-papersonline.net/cgi-bin/links/page.cgi?g=Detailed/37813.html;d=1 Conference Paper 2008 http://www.ifac-papersonline.net/cgi-bin/links/page.cgi?g=Detailed/37813.html;d=1 Coating Weight Estimation Through Nonextensive Statistical Analysis, Proceedings of the International Conference on Nonextensive Statistical Mechanics – Foundations and Applications 2008 Anastasiadis, A. D. and Kalamatianos, D. Conference Paper 2008 System and control theory furthers the understanding of biological signal transduction. In I. Queinnec, S. Tarbouriech, G. García, and S.-I. Niculescu, editors, Biology and control theory: current challenges, volume 357 of Lecture Notes in Control and Information Sciences. ISBN 978-3-540-71987-8. , Springer-Verlag 2007 E. Bullinger, R. Findeisen, D. Kalamatianos, and P. Wellstead http://dx.doi.org/10.1007/978-3-540-71988-5_6 Book Chapter 2007 http://dx.doi.org/10.1007/978-3-540-71988-5_6 Optimal metabolic regulation by time varying enzyme activities: a control theoretic approach, Proceedings of the Foundations of Systems Biology in Engineering Conference 2007, pp 491-496, Stuttgart, Germany. 2007 D. Oyarzun, B. Ingalls, and D. Kalamatianos http://www.hamilton.ie/d.o/docs/oyarzun_etal07c.pdf Conference Paper 2007 http://www.hamilton.ie/d.o/docs/oyarzun_etal07c.pdf Novel FT-NIR instrumentation for real-time blood monitoring. , Annual Meeting of the Association of Physical Scientists in Medicine 2007 D. Kalamatianos, P. Liatsis, and P.E. Wellstead Conference Paper 2007 Active alignment for two-beam interferometers, Review of Scientific Instruments 2006 77 1 D. Kalamatianos, P.E. Wellstead, J.M. Edmunds, and P. Liatsis http://dx.doi.org/10.1063/1.2150823 Journal Paper 2006 http://dx.doi.org/10.1063/1.2150823